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X-WR-CALNAME:microBEnet: the microbiology of the Built Environment network
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X-WR-CALDESC:Events for microBEnet: the microbiology of the Built Environment network
BEGIN:VEVENT
DTSTART;VALUE=DATE:20160404
DTEND;VALUE=DATE:20160406
DTSTAMP:20260514T144849
CREATED:20151202T193547Z
LAST-MODIFIED:20151202T193547Z
UID:43040-1459728000-1459900799@microbe.net
SUMMARY:Sloan Microbiology of the Built Environment Data Analysis Workshop (San Diego\, CA)
DESCRIPTION:Announcement: Sloan Microbiology of the Built Environment Data Analysis Workshop (secrets of QIIME\, VAMPS and QIITA) April 4-5\, 2016 \nUniversity of California\, San Diego \nApplication Deadline — February 15\, 2016 — mitchellsogin@gmail.com \nThis workshop\, staffed by the developers of QIIME\, VAMPS and QIITA\, invite participants from the Microbiology of the Built Environment program to learn hands-on how to use these tools on their own data\, to perform meta-analyses that combine built environment datasets and other datasets such as those from the Human Microbiome Project\, Earth Microbiome Project\, American Gut and the Census of Deep Life\, and to participate in the development of new tools and standards that will facilitate a new generation of research into the microbiology of the built environment. \nApplicants should provide the following to Mitch Sogin (sogin@mbl.edu): \n\nDetailed contact information\nCurrent curriculum vitae\nA one-page statement of your reasons for wanting to attend this workshop\nA one-page summary of research experience\nA very brief statement of expectations for the workshop.\n\nThe two-day workshop organized by Rob Knight and Mitchell Sogin will convene April 4 and 5\, 2015 at the University of California San Diego and will cover the cost of travel\, housing and food. Successful applicants will have the opportunity to analyze their own datasets but must participate in a conference call to be held ~March 7th. \nDetailed contact information \n\nCurrent curriculum vitae\nA one-page statement of your reasons for wanting to attend this workshop\nA one-page summary of research experience\nA very brief statement of expectations for the workshop.\n\n\nThe following is a preliminary schedule for the workshop. \nMarch 7\, 2016: Required conference call: do you have appropriate data\, what data do you have\, what metadata do you have? Participants must attend this call to attend the workshop. \n1 week before workshop (March 28\, 2016): \nConference call: verify that data and metadata uploaded correctly\, fix any outstanding issues\, etc. Participants must attend this call to attend the workshop. \nApril  3 — Travel day \nApril 4\, 2016 \n9:00- 9:30 introductions \n9:30-11:30 quick ways of looking at data in VAMPS \n11:30-12:00 audience feedback on VAMPS \n12:00-13:00 lunch \n13:00-15:00 introduction to QIITA \n15:00-15:30 audience feedback on QIITA \n15:30-16:00 coffee break/last check on datasets \n16:00 -18:00 participants introduce the views of their datasets and main hypotheses etc. — Max 2 slides \nDinner/discussion \nApril 5\, 2016 \n9:00-10:00 overview of key theoretical or technical issues prompted by participant projects (e.g. issues related to OTU picking\, fungal or eukaryotic data handling\, combining analyses\, etc.) \n10:00-12:00 exploration on own with availability of the developers to answer questions \n12:00-13:00 lunch \n13:00-15:00 exploration on own with availability of the developers to answer questions \n15:30-16:00 coffee break \n16:00-17:30 meta-analysis of all participant and other available built environment data \n17:30-18:30 discussion of metadata\, standards\, and feedback on tools \nDinner/additional discussions \nApril 6 — Travel day \nTwitterFacebookPress ThisLinkedInEmailMorePrintRedditWhatsAppTumblrPocketPinterestLike this:Like Loading...\n\n	Related\n
URL:https://microbe.net/event/sloan-microbiology-of-the-built-environment-data-analysis-workshop-san-diego-ca/
CATEGORIES:Workshop/Meeting
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