I just read an interesting article where superbug infections were tracked across Europe. Isolates had their whole genome sequenced and then the resulting visualizations were put online for people to see (you can also upload your own data to the site). Not only is this a really useful tool in terms of observing the spread of superbugs, …
The publication of a paper “Tracking a Hospital Outbreak of Carbapenem-Resistant Klebsiella pneumoniae with Whole-Genome Sequencing” has drawn a lot of attention, presumably in large part because it occurred at an NIH facility. [http://stm.sciencemag.org/content/4/148/148ra116.full.html, DOI: 10.1126/scitranslmed.3004129] I work on the microBEnet project as a “building scientist” to help achieve the Sloan Foundation’s programs goals of …