There is a whole issue of the Annals of the NY Academy of Sciences that may be of interest. The focus of the issue is on Antimicrobial Therapeutics Reviews.
Some of the papers are freely available. These are
- Resistance diagnosis and the changing epidemiology of antibiotic resistance(pages 5–17) by David McAdams
- Resistance diagnosis and the changing economics of antibiotic discovery (pages 18–25) by David McAdams
- A brief primer on genomic epidemiology: lessons learned from Mycobacterium tuberculosis (pages 59–77) by Jennifer L. Guthrie and Jennifer L. Gardy
-
Challenges and opportunities for whole-genome sequencing–based surveillance of antibiotic resistance (pages 108–120) by Anita C. Schürch and Willem van Schaik
- Application of genomic technologies to measure and monitor antibiotic resistance in animals (pages 121–135) by Jian-Qiang Su, Li Cui, Qing-Lin Chen, Xin-Li An and Yong-Guan Zhu
- Challenges and opportunities for whole-genome sequencing–based surveillance of antibiotic resistance By Anita C. Schürch and Willem van Schaik in the Annals of the NY Academy of Sciences
Definitely worth taking a look.