First of all, a big thanks to Jonathan Eisen for reaching out to us. We are grateful for the invitation to introduce our project to the microBEnet community. And we’d love to talk if you are doing citizen science work using metagenomic tools. Citizen science comes in many different shapes and sizes. It can be …
In January 2014 I wrote this post about “microbiome” sequencing services. I have gotten many outside requests for the following information — what places (companies, Universities, government agencies, etc) provide contract services for rRNA PCR and sequencing? Source: Request — Information on Places that do rRNA sequencing as a service — microBEnet: the microbiology of the …
Got an email from the developers of IRIS AI the other day: And decided to play around with it. So I went to our Zotero collection on microbiology of the built environment: From there I got a paper and found it’s URL: Meadow, J. F., Altrichter, A. E., Kembel, S. W., Kline, J., Mhuireach, G., Moriyama, M., Northcutt, …
This is definitely worth checking out – a Citizen Microbiology project on the Built Environment From the Good Germs project. More on the project: There is a growing popular and policy interest in the microbiome, and the possibilities of more nuanced or ‘probiotic’ ways of living with germs. To date however there has been limited …
OMG. I want one. I want two. No – I want dozens. Caption from Gizmodo: “Introducing the LudusScope, a 3D-printed, open-sourced system that lets you control and play games with living microbes on your smartphone. Tormenting single-celled organisms has never been so much fun.” Source: This Smartphone Microscope Lets You Play Games With Microbes …
Andrew Moeller gave a talk at UC Davis Tuesday on “The evolution of the human gut microbiome”. He is a post doc at UC Berkeley working in the Nachman lab. I did not have a working computer so – gasp – I took notes with paper and pen. The talk was quite interesting and I thought …
The NY Times is reporting that an outbreak of Shigellosis in Flint may be connected to the water crisis there (in that people’s changes in their hand cleaning and other washing behaviors due to the water may have contributed to the outbreak). See the story (linked below) for more details. If true this is yet …
Worth checking this out I think. Source: Contributions of pioneering women in indoor environment and health – Nazaroff – 2016 – Indoor Air – Wiley Online Library From the introduction: On occasion, this journal has recounted historical achievements in the indoor air sciences. Sundell[1] provided a broad-ranging overview. I have written about the history of …
Definitely worth checking this out. Recent molecular studies have identified substantial fungal diversity in indoor environments. Fungi and fungal particles have been linked to a range of potentially unwanted effects in the built environment, including asthma, decay of building materials, and food spoilage. The study of the built mycobiome is hampered by a number of …
Definitely worth checking this one (from Burke and Darling) out if you do microbial diversity studies … Background The bacterial 16S rRNA gene has historically been used in defining bacterial taxonomy and phylogeny. However, there are currently no high-throughput methods to sequence full-length 16S rRNA genes present in a sample with precision. Results We describe …