home .Featured Microbiome Centers – Input Wanted

Microbiome Centers – Input Wanted

Compiling a list of Microbiome Centers from the US and elsewhere. I had previously done this and have no made a new effort in part in association with a meeting of Microbiome Centers organized by Jen Hughes Martiny and others of the UC Irvine Microbiome Initiative. I would love suggestions for other centers to add to this list and any edits or corrections to this list.

I will update this list as comments come in but for the latest list see this Google Sheet.

Institute or Organization Country Title
Argonne National Lab United States Microbiome Center
Arizona State University United States Alkek Center for Fundamental and Applied Microbiomics (CFAM)
AMICI Austria Austrian Microbiome Initative
Baylor College of Medicine United States Center for Metagenomics and Microbiome Research
Baylor College of Medicine United States Texas Children’s Microbiome Center
Bigelow Laboratory United States Bigelow Laboratory Single Cell Genomics Center
Boston University United States Boston University Microbiome Initiative
Brigham and Women’s United States Massachusetts Host Microbiome Center
California Institute of Technology United States Center for Environmental Microbial Interactions
Chan Zuckerberg United States Chan Zuckerberg Biohub Microbiome
Cleveland Clinic United States Center for Microbiome and human Health
Colorado State University United States Microbiome Network
Cornell University United States Cornell Institute of Host-Microbe Interactions and Disease
Department of Veteran Affairs United States Military and Veteran Microbiome:
Consortium for Research and Education:
Duke University United States Duke Microbiome Center
Dalhousie University Canada Integrated Microbiome Resource
Emory University United States Emory Microbiome Group
George Mason University United States Microbiome Analysis Center
Ghent University Belgium Center for Microbial Ecology and Technology
Helmholtz Zentrum Munich Germany Research Unit for Comparative Microbiome Analyses
Institute of Agricultural and Food Biotechnology Poland Institute of Agricultural and Food Biotechnology
John Hopkins University United States Microbiome Forum
Karolinska Sweden Centre for Translational Microbiome Research (CTMR)
Kiel University Germany Metaorganism Research Center
Kings College London United Kingdom Center for Host Microbiome Interactions
Lawrence Berkeley National Lab United States Microbes to Biomes
Lawrence Berkeley National Lab United States National Microbiome Data Collaborative
Lawson Health Research Institute Canada Canadian Centre for Human Microbiome and Probiotic Research
Leiden University Netherlands Center for Microbiome Analyses and Therapeutics
Mayo Clinic United States Microbiome Program
Medical College of Wisconsin United States Center for Microbiome Research
Medical University of Graz, Austria Austria Center for Microbiome Research
Medical University of South Carolina United States Program for Human Microbiome Research
McGill Canada Microbiome Disease and Tolerance Center
MIT and Mass General United States The Center for Microbiome Informatics and Therapeutics (CMIT)
Mount Sinai United States Microbiome Translational Center
Northern Arizona University United States The Pathogen & Microbiome Institute
Northern Arizona University United States Center for Applied Microbiome Sciences
Oregon State University United States Oregon State University Microbiome Initiative
Pacific Northwest National Laboratory United States Microbiomes in Transition
Pennsylvania State University United States Penn State Micriobiome Center
Quadram Institute United Kingdom Quadram Institute
Rutgers University United States Center for Nutrition, Microbiome, and Health
Stanford University United States The Center for Human Microbiome Studies
Texas A & M United States Core for Integrated Microbiota Research (CIMR)
TGEN United States Clinical Microbiome Services Center
University of Buffallo United States UB Microbiome Research Center
University of Calgary Canada International Microbiome Center
University of California, Berkeley United States JBIMS
University of California, Davis United States Microbiome Special Research Program
University of California, Irvine United States UCI Microbiome Initiative
University of California, Los Angeles United States UCLA Microbiome Center
University of California, Riverside United States UCR Microbiome Initiative
University of California, San Diego United States UC San Diego Center for Microbiome Innovation
University of Chicago United States The Microbiome Center
University College Cork Ireland APC Microbiome Ireland
University of Colorado, Boulder United States Center for Microbial Exploration
University of Colorado, Denver United States The Microbiome Program
University of Connecticut United States Center for Microbial Systems, Ecology and Evolution
University of Connecticut United States MARS: Microbial Analysis, Resources and Services
University of Hawaii United States Center for Microbiome Analysis through Island Knowledge & Investigation
University of Massachusetts United States UMass Center for Microbiome Research
University of Michigan United States Michigan Microbiome Project (MMP)
University of Oregon United States UO Microbiome Initiative
University of Oregon United States Microbial Ecology and Theory of Animals (META) Center for Systems Biology
University of Pennsylvania United States The PennCHOP Microbiome Program
University of Pennsylvania United States Center for Host-Microbial Interactions
University of Pittsburgh United States University of Pittsburgh Center for Medicine and the Microbiome
University of Queensland Australia Australian Center for Ecogenomics
University of South Florida United States Initative on Microbiomes
University of Texas Southwestern United States Microbiome Research Laboratory
University of Vienna Austria Centre for Microbiology and Environmental Systems Science
University of Washington United States Center for Microbiome Sciences & Therapeutics (CMiST)
University of Waterloo Canada Waterloo Centre for Microbial Research
University of Wisconsin United States Microbiome Hub
Vanderbilt University United States The Vanderbilt Microbiome Initiative (VMI)
Other Entities Country Title
Metageneopolis France Metageneopolis
German Research Foundation Germany Intestinal Microbiota – a Microbial Ecosystem at the Edge between Immune Homeostasis and Inflammation
Bioaster France Bioaster Microbiology Technology Institute
AGA United States AGA Center for Gut Microbiome Research & Education
India Ministry of Science and Technology India Institute of Microbial Technology (IMTECH)
Janssen Janssen Human Microbiome Institute

19 thoughts on “Microbiome Centers – Input Wanted

    1. thanks for the suggestion – this does not seem to be focused on microbiomes or related topics (it seems much bigger) so I am not going to include it unless you can point me to other information

  1. University of Vienna, Austria, Centre for Microbiology and Environmental Systems Science
    cmess.csb.univie.ac.a

  2. Please notify me of updates/additions to your list. I think it would be a helpful step to identify those “centers” actually funded by NIH for microbiome research. Is there an organized network of same?

    This is great work. Thanks.

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