Computational Biologist Postdoctoral Fellow – DOE Joint Genome Institute

Function-driven Metagenomics for Energy and the Environment The mission of the U.S. Department of Energy Joint Genome Institute (DOE JGI) is to advance genomics in support of the DOE missions related to energy and the environment. Located in Walnut Creek, California, the DOE JGI provides integrated high-throughput DNA sequencing, synthesis, and computational analysis that enables …

Metagenome Data Scientist – DOE Joint Genome Institute

Harnessing Microbiome Data Science for Energy and the Environment The mission of the U.S. Department of Energy Joint Genome Institute (DOE JGI) is to advance genomics in support of the DOE missions related to energy and the environment. Located in Walnut Creek, California, the DOE JGI provides integrated high-throughput DNA sequencing, synthesis, and computational analysis …

New BioBE publication on daylight and bacterial communities in dust!

This highly-anticipated study on the effect of natural daylight treatments on whole bacterial communities in household dust from the University of Oregon’s Biology and the Built Environment Center is now available! Daylight exposure modulates bacterial communities associated with household dust Ashkaan K. Fahimipour , Erica M. Hartmann, Andrew Siemens, Jeff Kline, David A. Levin, Hannah Wilson, Clarisse …

Help wanted w/ compiling information on “Citizen Microbiology” projects #CitizenMicrobiology

I am compiling information on past, present and future “Citizen Microbiology” projects. Basically I am looking for examples of projects that could fit VERY BROADLY into the concept of citizen or participatory science and involve microbes. Examples include: Participatory Research Classes such as SeaPhages https://seaphages.org Tiny Earth https://tinyearth.wisc.edu Human Microbiome Sample Crowdsourcing The American Gut Project http://americangut.org …

Job posting (postdoc): Metagenomics of spacecraft-associated microbes at JPL

Really exciting sounding postdoc opportunity with Parag Vaishampayan at JPL, “Metagenomics approach for genetic inventory of microbes to identify, document, and archive broadest spectrum of potential terrestrial contaminants during the spacecraft assembly process“. Plus I have to say that is the coolest looking recruitment banner that I’ve ever seen in my life. Job posting here.  …

NASEM Legionella Meeting 4 (Oct 22nd 2018)

Another NASEM meeting of possible interest.  Both in person and online, October 22nd, 2018.  Here’s a link to the registration.   We invite you to join the open session of our fourth committee meeting. At the meeting we will hear from the U.S. Department of Veterans Affairs (DVA) on implementation of their 2014 directive. We will also hear …

NASEM Webinar “Microbiome, Wastewater Treatment, and Antibiotic Resistance” 9/25/18

Just got this e-mail regarding an upcoming NASEM Webinar “Microbiome, Wastewater Treatment, and Antibiotic Resistance” on 9/25/18.  Here’s the description of the event: In 2017, the National Academies of Sciences, Engineering and Medicine released the report, Microbiomes of the Built Environment: A Research Agenda for Indoor Microbiology, Human Health, and Buildings. The report highlights the importance …

Lake Arrowhead Microbial Genomics Meeting (#LAMG2018) Day 3

Day 3 of the meeting was virus day!  Viruses have often gotten short shrift at these kinds of meeting, especially once 16S rRNA sequencing took over the microbial world.  But the balance is shifting back, largely because of metagenomics. First up was Andrew J. Hryckowian from Stanford University “Bacteriodes thetaiotaomicron as a Chassis for Understanding …