I was at a meeting a few weeks ago where the topic of fungal diversity surveys was discussed and many people there commented on how ITS based surveys (one of the main approaches for culture independent studies of fungi) had some limitations. ITS stands for the “internal transcribed sequence” and it is a region in …
Report on Day 2 of the “Microbiomes of the Built Environment: From Research to Application”. My report and Storify of tweets from Day 1 can be found here. Session #1 “Beyond Bacteria: Viral and Fungal Ecology in Indoor Environments” First speaker was Linsey Marr “Viruses in the Built Environment”. Talking about their work looking at …
Today was the first day of the 3rd meeting in the NAS-sponsored series of “Microbiomes of the Built Environment: From Research to Application” meetings. This meeting was held at UC Irvine and the goal was to provide information for the NAS committee that will subsequently produce a report on the status of the field. For …
In January 2014 I wrote this post about “microbiome” sequencing services. I have gotten many outside requests for the following information — what places (companies, Universities, government agencies, etc) provide contract services for rRNA PCR and sequencing? Source: Request — Information on Places that do rRNA sequencing as a service — microBEnet: the microbiology of the …
Collecting together here some reports from the Lake Arrowhead Microbial Genomes Meeting David Coil’s summaries Lake Arrowhead Microbial Genomics #LAMG16: Day 4 and Random Thoughts Lake Arrowhead Microbial Genomes #LAMG16: Day 3 Lake Arrowhead Microbial Genomics #LAMG16 Report: Day 2 Lake Arrowhead Microbial Genomics #LAMG16 Report: Day From me microbiology of the Built Environment session …
microBEnet sponsored a “Microbiology of the Built Environment” session at the Lake Arrowhead Microbial Genomes meeting earlier today. The schedule for the session is below Rachel Dutton University of California San Diego, La Jolla, CA “Genetics and Genomics of the Simple Microbial Communities from Cheese” Elizabeth Hénaff Weill Cornell Medicine, New York, NY “The Microbiome …
Esther Singer opened the day talking about “Metagenomics to Reveal Correlations between Switchgrass Ecotypes and their Microbial Communities”. She told a nice story about the ecotype-specificity of the rhizosphere and phyllosphere microbial communities. I was surprised that for some bacteria this was evident even at the phylum level… so big differences. Daria Van Tyne “Changes …
Well, this is enormously big news: The FDA today banned the use of triclosan as an ingredient in antibacterial soaps, saying that such cleaners were no better than regular soap. Source: FDA bans antibacterial soaps containing triclosan Lots and lots and lots of other stories about this. See for example FDA announcement Washington Post NPR …
A few weeks ago I attended a course entitled “Strategies and Techniques for Analyzing Microbial Population Structure” at the Marine Biological Laboratory in Woods Hole, along with a number of other students, postdocs and faculty engaged in the study of the microbiology of the built environment (as well as the oceans, humans, animals, plants). This excellent …
Here’s my report from Day 2 of the Microbiology of the Built Environment Conference in Boulder… the 5th annual and last of its kind! Storify of the tweets from the day below. The opening talk on Day 2 was by Martin Taubel from the National Institute for Health and Welfare, Finland, “Of house dust and …