Undark magazine Q&A about  #Covid19

Useful Q&A and possibility to submit other questions via Undark Magazine.   Undark readers have sent us numerous questions, comments, and observations on the Covid-19 pandemic. Our publisher responds. Source: Dear Readers: Fielding Your Thoughts and Questions on Covid-19

Citizen Science Project on the Tomato Seed Microbiome

(cross posted to the UCD Microbiome SRP blog) What do you get when you combine UC Davis alumni, tomato seeds, and citizen science?   That would be Project GASP (“Germ”-ination Alumni Science Project).  I didn’t come up with the name, I swear.   This project, sponsored and paid for by the College of Biological Sciences at UC …

Interesting preprint on the possible value in “instantaneous digital contact tracing” for control of #COVID19 pandemic

Interesting preprint worth checking out (note – this is a non peer reviewed preprint). “It reports new medical research that has yet to be evaluated and so should not be used to guide clinical practice.” Abstract: Mobile phone apps implementing algorithmic contact tracing can speed up the process of tracing newly diagnosed individuals, spreading information …

New preprint of interest on SARS-CoV-2 Aerosol and surface stability #COVID19 #Coronavirus 

There is a new preprint of interest to those interested in SARS-CoV-2, the novel coronavirus spreading around the world. Details: Aerosol and surface stability of HCoV-19 (SARS-CoV-2) compared to SARS-CoV-1 Neeltje van Doremalen, Trenton Bushmaker, Dylan Morris, Myndi Holbrook, Amandine Gamble, Brandi Williamson, Azaibi Tamin, Jennifer Harcourt, Natalie Thornburg, Susan Gerber, Jamie Lloyd-Smith, Emmie de …

The #microbenet and BioBE Center stab at a review of COVID-19 and the Built Environment

(updated 4/7/20 with revised preprint and publication information) So late last week, the folks at the BioBE Center at the University of Oregon contacted us wanting to write a review of built environment considerations related to the 2019 Novel Coronavirus (COVID-19) outbreak.  We worked furiously on it for a couple of days and through the …

Story behind the paper: RtxA type 1 secretion system and other virulence factors in Legionella

So this work is a spinoff of a big project that we were involved in (but almost all of the work was done by Amy Pruden’s lab at Virginia Tech).  In the larger project, they examined the genomes of over 100 clinical isolates of Legionella pneumophila, as well as 10 clinical isolates from patients during …

Story behind the paper: Christensenlla genome analysis

So way back in 2014 a really interesting paper came out about a family of bacteria called Christensenellaceae, which was found to be the most heritable group in the human gut microbiome.  Furthermore this group (represented by Christensenella minuta) was furthermore associated with low BMI.  Most intriguingly, mouse work demonstrated that the injection of cultured …