Metanalysis: Cleaning Hospital Room Surfaces to Prevent Health Care—Associated Infections

I recently came across this detailed review “Metanalysis: Cleaning Hospital Room Surfaces to Prevent Health Care—Associated Infections” from the Annals of Internal Medicine.  I think this is a fascinating topic because hospitals have to walk such a fine line with regards to microbes.  On the one hand they want to avoid the probably counter-productive “kill …

Maps and graphics for a participatory research project

I’m enjoying making maps of participants for kittybiome, a new participatory research project on the microbiome of cats. It was very easy to make this map using Google Maps. (And using Google Maps is particularly appropriate for the project because we have a celebrity cat named NDA, who lives with inventor of Google Maps participating in the project.) Here …

microBEnet journal club: MetaBAT for reconstructing single genomes from complex microbial communities

    There is an interesting paper out a few days ago in PeerJ: MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities. By Dongwan D. Kang, Jeff Froula, Rob Egan, Zhong Wang​.  The key to what they do in the paper is summarized in Figure 1:   The legend is below: There are three preprocessing steps before MetaBAT is …

Mars Dome – a cool closed system

According to a recent BBC news article, NASA is doing a Mars simulation project to see if six live human beings can survive being isolated in a dome together. From a MoBE perspective, it would be cool to study this system. It’s completely closed to outside microbes – the people living in this dome have to …

Microbiome informed design – air quality, avoiding filtering, and lichens

This is one of those stories / articles / posts that simultaneously fascinates me and freaks me out a bit and for which I fluctuate wildly between those two points of view: bioME – RSA Human By Nature Entry on Behance By Candice de Aguiar Her basic design idea here is to allow for more microbial diversity …

Interesting and important new paper: Microbial composition of purified waters 

There is an interesting and potentially important new paper out from Caitlin Proctor, Marc Edwards and Amy Pruden: Microbial composition of purified waters and implications for regrowth control in municipal water systems in Environmental Science: Water Research & Technology.  The abstract is below:

Schizophrenia and the microbiome

Mental health and its possible relation to the microbiome is a controversial topic in today’s news. Here’s new research suggesting that schizophrenia may be linked to the oropharyngeal microbiome, as the study found “high-level differences” in bacteria of people diagnosed with the disorder and of those without. If true, this could add insight into the …