A Figshare Collection on Microbiology of the Built Environment

I got an email the other day about a new feature at Figshare.  It was about a new feature they have called “Collections“. But before I describe that I should probably describe Figshare.  Figshare is a repository for depositing and sharing various digital objects including not just Figures (which they name kind of implies … …

Top 50 most wanted fungi

In this new paper in MycoKeys we present a set of automatically updated lists of the most abundant fungal species hypotheses known from sequence data, but for which little to no taxonomic information is available. If anyone can shed light on the taxonomic affiliation of these species hypotheses, we’d be all ears. Through a “built environment” switch, …

Strategies & Techniques for Analyzing Microbial Population Structures (STAMPS) Course 8/3-8/13

The Marine Biological Laboratory in Woods Hole. MA will be offering their “STAMPS”: (Strategies & Techniques for Analyzing Microbial Population Structures) Course this August (8/3-8/13). Course Dates: August 3 — August 13, 2016 Deadline: April 8, 2016 | Apply here Course Website Course Schedule Directors: Mitchell L. Sogin, MBL and David B. Mark Welch, MBL …

Mining the urban sewage for safe water indicators

Hello Microbe.net readers, I am Fangqiong. I recently received the Microbiology of the Built Environment Postdoc Fellowship from the Alfred P. Sloan Foundation. I will be studying a kind of built environment microbiome, the microbiome in the urban water cycle, in Professor Eric Alm’s lab at MIT. I am very grateful to the Sloan Foundation …

Near perfect balance in a microbiome paper – hopeful yet no hype: The microbiome of the built environment and mental health

Source: The microbiome of the built environment and mental health | Microbiome | Full Text Andrew J. Hoisington, Lisa A. Brenner, Kerry A. Kinney, Teodor T. Postolache and Christopher A. Lowry When I saw the title of this I cringed a bit, worried that this paper would be overselling what we know about the microbiome and …

MoBE Postdoctoral Fellowship: Characterization of Microbial Contributions to Volatile Organic Compounds in the Residential Environment

Microbes are ubiquitous in the built environment and present as a unique ecological component of importance for indoor air quality. One major influence of microbial activities on indoor air quality is through the emission of volatile organic compounds (VOCs). Although a variety of microbial VOCs (mVOCs) have been identified in laboratory studies, compounds exclusively of …

Changes in Microbes of the Built Environment in Early Stages of Urbanization

  In our previous 2012 Sloan project “Microbes of the built environment spanning human urbanization” we studied environmental microbes in gradients of transculturation and of urban social stratification at the basin of the Amazon River, from hunter-gatherer villages in Peru, to the modern city of Manaus. The results showed an association between changes in home …

Gearing up the UNITE database for the built mycobiome

Gearing up the UNITE database for the built mycobiome The team behind the UNITE database for molecular identification of fungi has been granted support from the Sloan Foundation to strengthen the support for fungi from the built environment. Launched in 2001 as an ITS database for identification of ectomycorrhizal fungi in the Nordic countries, UNITE …