Well, just got notified via automated Google Scholar searches of a new book in the NCBI Book collection. This one seems of relevance both to studies of microbiology of the built environment and to some recent news stories: The Airliner Cabin Environment and the Health of Passengers and Crew. It is a report from the National Research Council …
Some interesting things in this post from Kelly Rae Chi at the Scientist: Metagenomics Mash-Up. It includes a discussion of metagenomics generally and then some metagenomic tools including MEGAN5, Kraken, MG-RAST, Metavir, and HI-C. The section on HI-C discusses the work of Chris Beitel in my lab. If you are doing metagenomic analysis or considering it or …
Quick post here. The Robert Wood Johnson Foundation has a podcast on “Pioneering Ideas” and it covers microbiomes of the built environment this week:1 RWJF Pioneering Ideas Podcast: Episode 5 | Conspiracy Theories, Microbiomes & More – Robert Wood Johnson Foundation. They also give a nice plug for microBEnet. From their site: Microbiomes and Design (26:25) — …
Earlier this week I saw a fascinating talk by Rachel Dutton on the microbial communities in cheese rinds. Rachel is currently a Bauer Fellow at Harvard University and for the last few years she has been studying microbial communities in cheese rinds. She was at UC Davis on Monday to give a talk and it …
Today a colleague sent me a link to a Genome Biology paper entitled “The Kardashian index: a measure of discrepant social media profile for scientists.” At first glance, it reminded me of Greg Caporaso’s post about Twitter last month. But as I continued to read, the slight truth behind the premise described in the paper fascinated, …
Many recent news stories have been discussing a case of an outbreak in a hospital in Greenville, SC that has apprently been traced to drinking water contamination. Thus this may be of interest to a variety of people. See some links below: 4th patient with GHS infection dies. Fourth bacterial infection death reported at South …
There is a paper that just was published that possibly will be of interest to those interested in studying microbial ecology of drinking water (or other water systems for that matter): Methodological approaches for studying the microbial ecology of drinking water distribution systems. Unfortunately the paper is not freely or openly available. The paper covers many topics …
Well, been having many discussions recently about PCR amplification happening from “negative” controls where no sample DNA was added. Such amplification is alas pretty common – due to contamination occurring in some other material added to the PCR reaction. Obviously it would be best to eliminate all DNA contamination of all reagents and all PCRs. …
There is a new report from the American Academy of Microbiology out that may be of interest: Viruses Throughout Life & Time: Friends, Foes, Change Agents. In a way this could be seen as a formal declaration of viral love by a collection of eminent scientists. Mostly I agree with what is in the report, through …
Got alerted to a very interesting paper because I have subscribed to Google Scholar automated updates for Brent Stephens (see a full list of Google Scholar pages for researchers working on microbiology of the built environment here). The paper is: Tools to improve built environment data collection for indoor microbial ecology investigations by Tiffanie Ramos and Brent Stephens …