Microbial biogeography of a university campus

Saw this paper by Ashley Rose and Josh Neufeld, “Microbial biogeography of a university campus” and just had to check it out.  Basically the authors conduced a survey of door handles across 65 buildings and three time points on the Waterloo campus.  What I think it most interesting about their results is the finding that …

Changing How We Talk About Antibiotic Resistance

I was catching up on my NPR shows this evening and this one is definitely worth a listen. Here are the slides that they talk about in the podcast that summarize conversations with a focus group in England about antimicrobial resistance. Science Friday interviews Ed Young (who I highly recommend you follow on Twitter if you don’t already) …

Sloan Microbiology of the Built Environment Data Analysis Workshop (secrets of QIIME, VAMPS and QIITA)

Submitted to me by Rob Knight. Announcement: Sloan Microbiology of the Built Environment Data Analysis Workshop (secrets of QIIME, VAMPS and QIITA) April 4-5, 2016 University of California, San Diego Application Deadline — February 15, 2016 — mitchellsogin@gmail.com This workshop, staffed by the developers of QIIME, VAMPS and QIITA, invite participants from the Microbiology of …

Antibiotic resistance genes in “black gold”

Sometimes efforts to be environmentally friendly can give rise to microbial challenges. This was nicely described by Katie Dahlhausen in her recent post about water quality about green buildings. Other examples include observations that Legionella pneumophila can be contracted from shower heads and the use of low flow shower heads and lower water temperatures may increase its transmission. Likewise, wastewater (e.g., Environmental and …

Interesting possible model for microbiomes and space travel: bees

Just got done looking at this paper which I found by searching Google Scholar for “indoor bacteria”.  PLOS ONE: 16S rRNA Amplicon Sequencing Demonstrates that Indoor-Reared Bumblebees (Bombus terrestris) Harbor a Core Subset of Bacteria Normally Associated with the Wild Host A MiSeq multiplexed 16S rRNA amplicon sequencing of the gut microbiota of wild and indoor-reared …

Emily Anthes writes about Wildlife of Your Homes microbiome studies in the New Yorker 

“Every unswept corner of a home tells its own story”. By Bouyoun Kim from the New Yorker Website. Source: What the Dust in Your House Says About You – The New Yorker Nice article in the New Yorker by Emily Anthes about the Home Microbiome studies from the Wildlife of Your Homes project. It has some …

Early exposure to animals reduces risk of developing childhood asthma

More good news for animal lovers! A recent study on the effects of exposure to dogs and farm animals on childhood asthma was just published in JAMA Pediatrics. The article is entitled Early Exposure to Dogs and Farm Animals and the Risk of Childhood Asthma by T. Fall, C. Lundholm, A.K. Örtqvist, K. Fall, F. Fang, Ã…. Hedhammar, O. Kämpe, E. Ingelsson, C. Almqvist.  Here is the …

Finding Solutions to Antimicrobial Resistance

Two recent news articles cover some new attempts at curbing antimicrobial resistance. The first discusses Kaiser’s ban on 13 different antimicrobials that are commonly used on surfaces, like fabrics and finishes. Although this change will only affect future facilities, it is a step forward in reducing sources of antimicrobial resistance. This is especially important in hospitals, …