Strategies & Techniques for Analyzing Microbial Population Structures (STAMPS) Course 8/3-8/13

The Marine Biological Laboratory in Woods Hole. MA will be offering their “STAMPS”: (Strategies & Techniques for Analyzing Microbial Population Structures) Course this August (8/3-8/13). Course Dates: August 3 — August 13, 2016 Deadline: April 8, 2016 | Apply here Course Website Course Schedule Directors: Mitchell L. Sogin, MBL and David B. Mark Welch, MBL …

New papers on microbiology of the built environment, March 12, 2016

Forensic microbiology A cloud of distinction – Julian Smith  –  New Scientist ($1.99) Could the trails of microbes we leave behind be used to solve crimes? Julian Smith picks up the scent. (…) Like our hapless suspect, we all leave traces of our microbes behind. We are haloed by an invisible nebula of bacteria, fungi and viruses. …

Tilikum to Shed Light on Superbug Crisis?

You have all heard of Tilikum the killer whale. He’s known for killing 3 of his trainers and is featured in the documentary Blackfish. Regardless of where you stand in all of the controversy, Tilikum has been making the news once again due to an untreatable bacterial infection in his lungs. Here is the statement from SeaWorld: …

Journal Club: Antibiotics in Agroecosystems

A great review has come out on the use and ramifications of antibiotics in agroecosystems. “Antibiotics in Agroecosystems: Introduction to the Special Section” by Allison Frankiln et al is a review that attempts to get everyone on the same page about antibiotics, antibiotic resistant bacteria, and antibiotic resistant genes in the environment. The article highlights …

How to Deal with Superbugs in Waste Treatment Facilities

The Los Angeles Times posted an article yesterday on “Deadly superbugs from hospitals get stronger in the sewers and could end up in the Pacific Ocean”. While there is some truth to the matter, it is necessary to approach it with some skepticism. It is well known that antibiotic resistant bacteria are extremely prevalent in …

Cutting Board Companions

The authors of this new paper have really cooked up something interesting!  “Microbial Safety of Wood in Contact with Food: A Review” by Florence Aviat, et al and published in Comprehensive Reviews in Food Science and Food Safety is an 86-reference review on materials found in kitchens. Elisabeth Bik did list this in her March 7 blog of new papers, but this one …

Guest post from @northenlab on “Exometabolite niche partitioning”

Guest post from Trent Northen of LBNL. I wrote to Trent recently when I had seen a paper of his that I found fascinating: Exometabolite niche partitioning among sympatric soil bacteria.  So I asked if he would be willing to write a guest post about it. And so – he did.  It seems like the issues …

New papers on microbiology of the built environment, March 7, 2016

Microbes in the house Seasonal Dynamics of the Airborne Bacterial Community and Selected Viruses in a Children’s Daycare Center – Aaron J. Prussin II – PLOS ONE (OA) We have investigated the microbial community of the air in a daycare center, including seasonal dynamics in the bacterial community and the presence of specific viral pathogens. …

GSC18: Genomic Metadata Standards Consortium annual meeting, June 12-15th, 2016, Crete

The 18th Genomic Standards Consortium meeting 12-15 June 2016. Crete Hellenic Center for Marine Research GSC 18 will include 8 sessions. Each session will have a working group which would meet during the workshop and the chair of each session will summarise the conclusions of the working group during the workshop. Workshop participants are encouraged …