A few weeks ago I attended a course entitled “Strategies and Techniques for Analyzing Microbial Population Structure” at the Marine Biological Laboratory in Woods Hole, along with a number of other students, postdocs and faculty engaged in the study of the microbiology of the built environment (as well as the oceans, humans, animals, plants). This excellent …
Members of the QIIME development group, led by Greg Caporaso and Antonio Gonzalez, will teach a two-day workshop on bioinformatics tools for microbial ecology. The workshop will include lectures covering basic QIIME usage and theory, and hands-on work with QIIME to perform microbiome analysis from raw sequence data through publication-quality statistics and visualizations. The workshop …
This last winter, Gwynne Mhuireach at the University of Oregon taught a really interesting course entitled “Human Health and the Design of the Urban Microbiome”. She posted a description of the final “design charrette” here on microBEnet awhile back. I just asked her if she’d be willing to share her course materials for others interested …
CMB Summer Course on Microbial Ecology @ SIM 20th — 25th November, 2016 at The Sydney Institute of Marine Science (SIMS) Sydney, Australia This course provides an intensive training for scientists interested in the ecology of microorganisms within a range of environments, offering students practical hands-on experience in: Experimental/ sample design and statistical analysis Training …
A few weeks ago we wrapped up Spring Quarter here at UC Davis and the end of our experimental “Swabs to Genomes” class, taught as a freshman seminar. As we introduced here, the idea was to take a set of students from colonies on a plate (from a swab) through a collection of ready to …
Last week, Melissa Dsouza and Jack Gilbert at the University of Chicago hosted a Sloan sponsored MoBE Early Career Workshop. I had the pleasure of attending this well organized event and was inspired by this highly intelligent and motivated group of scientists. The future for the MoBE is bright indeed if these scientists are able to find jobs …
So – I am teaching in BIS002C – Biodiversity and the Tree of Life again at UC Davis. And I thought it might be of interest to share (and get feedback on) some of what I am teaching for this course. Quick summary – this is the third course in an Intro Bio series …
For the last few years our lab has been really excited about the idea of having undergraduates culture bacterial isolates and sequence their genomes. Starting with the Undergraduate Built Environment Genomes Project in 2011, we went on to re-write and upgrade the assembly pipeline that we use, followed by the publication of the “Swabs to …
Just a quick post here. I found this paper in JMBE when I was browsing in a special connection of ethics in biology. This was in the same volume of the journal and it struck me as something some people might find interesting. It is an article about undergraduate bioinformatics training: Undergraduate Bioinformatics Workshops Provide Perceived …
The Marine Biological Laboratory in Woods Hole. MA will be offering their “STAMPS”: (Strategies & Techniques for Analyzing Microbial Population Structures) Course this August (8/3-8/13). Course Dates: August 3 — August 13, 2016 Deadline: April 8, 2016 | Apply here Course Website Course Schedule Directors: Mitchell L. Sogin, MBL and David B. Mark Welch, MBL …