As people get more and more interested in the microbiology and microbiomes of the built environment, a critical additional step is to connnect this work to analyses of chemical compounds in the built environment. Studies of chemicals in the built environment have of course been going on for a long time (e.g., in studies of indoor …
“Microbiome” is such a hot term these days. And one key question many ask is “what does it mean?” A related question is – “where did the term come from?” I tried to tackle this many years ago on my blog with a post: The human microbiome – term being used in many ways – but at …
This is the third of three posts about the planetary protection workshop I attended at NASA Ames from March 24-26, 2015. The first is here. I mentioned, in my last post on forward contamination, that reverse contamination is the primary concern for Planetary Protection (PP). In this context, reverse contamination refers to the transport of Martian …
Last week, I came across a paper in PLOS ONE that looked interesting, especially in the light of the recent mBio paper that looked at sewage as a reflection of a city’s human-associated microbiome (also see this recent post on MicroBEnet). In the PLOS ONE paper “The Source of the River as a Nursery for …
In this week’s Best of MicrobiomeDigest, we’ll look at the effect of a “sea voyage” on the human oral and belly button microbiome. For those of you who are not familiar with Fisherman’s Friend (I am not sure if these are as popular in the rest of the world as they are in parts of Europe), it’s a British …
Microbiomes are everywhere. Not only inside and around us, but also in the scientific literature. Not too many years ago, only a handful of microbiology laboratories were analyzing the composition of the invisible communities that surround us. Today, it feels as if every other scientist is doing something microbiome-related. New techniques such as high-throughput sequencing and …
Just got pointed (by Laurie Garrett) to this call for proposals from the Bill and Melinda Gates Foundation: Addressing Newborn and Infant Gut Health Through Bacteriophage-Mediated Microbiome Engineering. Some key lines from the call: A growing body of evidence suggests that healthy gut function early in life plays a significant role in adult wellbeing. It is further …
Back in October 2013 I wrote a blog post here called “Building science measurements in the Hospital Microbiome Project: Part 1” where I described the types of building environmental and operational measurements we were making at the time as part of Jack Gilbert’s Sloan-funded Hospital Microbiome Project (Jeff Siegel at the University of Toronto also played a …
This week in eLife, our lab published a study entitled Gut bacteria are rarely shared by co-hospitalized premature infants, regardless of necrotizing enterocolitis (NEC) development. Spearheaded by a talented Banfield Lab post-doc, Tali Raveh-Sadka, in collaboration with Michael Morowitz’s Lab, the study aimed to find the causative agent in an outbreak of NEC cases that …
What is it? Gut Check is a game for 2-4 players where each player attempts to develop a healthy microbiome while interfering with the microbiomes of their opponents. Give your friends the plague, botulism and more! Go to work sick to get rid of a pathogen, take some probiotics, or have some lasagna (if you …