Behind the scenes: Microbial biogeography of a university campus My name is Ashley Ross (@ashanneross) and, during my final year as an undergraduate student in the Department of Biology at the University of Waterloo, I began to wonder which microorganisms I was contacting on a daily basis while on campus. Every day on my way …
Blog post prepared jointly by Andrew Doxey (@acdoxey) and Josh Neufeld (@joshdneufeld) The “aquariome” Back in 2013, as part of a project assessing aquarium microbial communities and their role in nutrient cycling, Laura Sauder (graduate student in the Neufeld lab) sequenced a shotgun metagenomic library from a freshwater aquarium biofilter that was installed on this …
Here is a new set of papers that came out in the past week(s) that I posted at MicrobiomeDigest, but that I also wanted to share here. Three of these papers are from BMC’s Microbiome journal, which recently has published several other built environment microbiology papers, so it’s worth checking out. Microbes in buildings Moisture …
What’s new in the intersection of microbiology and human use of the environment? Here are some recent papers and their abstracts. The first paper is important because it describes the microbiological conditions of the waters that will be used in the 2016 Olympics: Environmental and Sanitary Conditions of Guanabara Bay, Rio de Janeiro – Giovana …
Autumn is not just a beautiful season in which multicolored leaves fall to the ground from their branches. It is also a good time for all kinds of microbes to flourish with the new addition of delicious leaf litter nutrients. A new paper from Irga et al studies the connection between the fungi found on leaf litter and …
Saw this paper by Ashley Rose and Josh Neufeld, “Microbial biogeography of a university campus” and just had to check it out. Basically the authors conduced a survey of door handles across 65 buildings and three time points on the Waterloo campus. What I think it most interesting about their results is the finding that …
A selection of new papers of interest for this readership, collected from my blog MicrobiomeDigest: Microbes in the air Evaluation of the potential for virus dispersal during hand drying: a comparison of three methods – Patrick T. Kimmitt, Keith F. Redway – Journal of Applied Microbiology ($$) Aims: To use a MS2 bacteriophage model to compare three …
Here is a fun recent article by Vilanova et al. on the coffee machine bacteriome (open access in Nature’s Scientific Reports) that made me wonder why didn’t we think of doing this. In this study, the authors sampled the inner drip tray (below the capsule container) of nine different Nespresso capsule coffee machines. They found that Enterococcus sp. and Pseudomonas sp. were abundant in most …
One of the main goals of microBEnet has been to improve cross-talk between disciplines with the field of the microbiology of the built environment. One way we’ve attempted to accomplish that is through a manually curated collection of all publications relevant to the field. At the time we began, Mendeley seemed the obvious choice for …
Lots of cool new papers to share. Unfortunately, many are behind paywalls. Humans in hospitals Towards an antimicrobial ‘microglove’ – Ewoud Reilman – Scientific Reports (OA) Healthcare workers frequently experience difficulties in complying strictly to hand disinfection protocols. This study was therefore aimed at the development of a hand rub with antimicrobial activity that forms …